Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.32□□□□□ -0.12
CX3CR1P49238 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.32□□□□□ -0.12
CX3CR1P49238 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.32□□□□□ -0.12
CX3CR1P49238 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.32□□□□□ -0.12
CX3CR1P49238 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.32□□□□□ -0.12
CX3CR1P49238 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CX3CR1P49238 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.32□□□□□ -0.12
CX3CR1P49238 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.32□□□□□ -0.12
CX3CR1P49238 AL009183.1-201ENST00000603760 355 ntBASIC14.32□□□□□ -0.12
CX3CR1P49238 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CX3CR1P49238 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.32□□□□□ -0.12
CX3CR1P49238 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.32□□□□□ -0.12
CX3CR1P49238 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CX3CR1P49238 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.32□□□□□ -0.12
CX3CR1P49238 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.32□□□□□ -0.12
CX3CR1P49238 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CX3CR1P49238 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.32□□□□□ -0.12
CX3CR1P49238 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CX3CR1P49238 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CX3CR1P49238 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.32□□□□□ -0.12
CX3CR1P49238 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CX3CR1P49238 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 AC104109.2-201ENST00000602919 1418 ntBASIC14.32□□□□□ -0.12
CX3CR1P49238 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CR1P49238 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CX3CR1P49238 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CX3CR1P49238 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 KRT18P34-201ENST00000488218 1270 ntBASIC14.31□□□□□ -0.12
CX3CR1P49238 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 AC109635.5-201ENST00000533593 962 ntBASIC14.31□□□□□ -0.12
CX3CR1P49238 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.31□□□□□ -0.12
CX3CR1P49238 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.31□□□□□ -0.12
CX3CR1P49238 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.31□□□□□ -0.12
CX3CR1P49238 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.31□□□□□ -0.12
CX3CR1P49238 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.31□□□□□ -0.12
CX3CR1P49238 AC064836.3-201ENST00000607928 673 ntBASIC14.31□□□□□ -0.12
CX3CR1P49238 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 BCAR1-209ENST00000546196 1340 ntBASIC14.31□□□□□ -0.12
CX3CR1P49238 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CX3CR1P49238 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CX3CR1P49238 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CR1P49238 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CR1P49238 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 LINC02447-202ENST00000501888 2146 ntBASIC14.3□□□□□ -0.12
CX3CR1P49238 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CR1P49238 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CR1P49238 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CR1P49238 CDC14C-201ENST00000428251 1719 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms