Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 IGHV3-62-201ENST00000520057 340 ntBASIC14.48□□□□□ -0.09
CSNK1A1P48729 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 AL138918.1-201ENST00000568306 659 ntBASIC14.48□□□□□ -0.09
CSNK1A1P48729 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.48□□□□□ -0.09
CSNK1A1P48729 AC008267.7-201ENST00000624570 1194 ntBASIC14.48□□□□□ -0.09
CSNK1A1P48729 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CSNK1A1P48729 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1A1P48729 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 AL589702.1-201ENST00000641229 1509 ntBASIC14.47□□□□□ -0.09
CSNK1A1P48729 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 ELL2P1-201ENST00000413990 1906 ntBASIC14.47□□□□□ -0.09
CSNK1A1P48729 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 MIR648-201ENST00000385046 94 ntBASIC14.47□□□□□ -0.09
CSNK1A1P48729 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 AC073389.1-201ENST00000595595 795 ntBASIC14.47□□□□□ -0.09
CSNK1A1P48729 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1A1P48729 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1A1P48729 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 NORAD-201ENST00000565493 5339 ntBASIC14.46□□□□□ -0.09
CSNK1A1P48729 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1A1P48729 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CSNK1A1P48729 AC079140.1-201ENST00000508039 487 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms