Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SOX2P48431 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.36□□□□□ -0.11
SOX2P48431 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SOX2P48431 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.36□□□□□ -0.11
SOX2P48431 AL355877.3-201ENST00000622820 899 ntBASIC14.36□□□□□ -0.11
SOX2P48431 AL805961.1-202ENST00000641562 540 ntBASIC14.36□□□□□ -0.11
SOX2P48431 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
SOX2P48431 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SOX2P48431 OR2I1P-210ENST00000642037 4691 ntBASIC14.36□□□□□ -0.11
SOX2P48431 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SOX2P48431 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.36□□□□□ -0.11
SOX2P48431 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 LINC02228-204ENST00000642115 2962 ntBASIC14.36□□□□□ -0.11
SOX2P48431 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.36□□□□□ -0.11
SOX2P48431 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SOX2P48431 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SOX2P48431 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SOX2P48431 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.36□□□□□ -0.11
SOX2P48431 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SOX2P48431 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SOX2P48431 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SOX2P48431 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SOX2P48431 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
SOX2P48431 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX2P48431 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.35□□□□□ -0.11
SOX2P48431 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX2P48431 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 FGFR3P6-201ENST00000457012 610 ntBASIC14.35□□□□□ -0.11
SOX2P48431 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.35□□□□□ -0.11
SOX2P48431 AC005412.3-201ENST00000580309 715 ntBASIC14.35□□□□□ -0.11
SOX2P48431 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.35□□□□□ -0.11
SOX2P48431 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX2P48431 AC008608.2-201ENST00000606089 416 ntBASIC14.35□□□□□ -0.11
SOX2P48431 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.35□□□□□ -0.11
SOX2P48431 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX2P48431 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SOX2P48431 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX2P48431 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX2P48431 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SOX2P48431 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX2P48431 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SOX2P48431 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX2P48431 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SOX2P48431 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX2P48431 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SOX2P48431 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX2P48431 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.34□□□□□ -0.11
SOX2P48431 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX2P48431 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SOX2P48431 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SOX2P48431 HCG4-201ENST00000418983 998 ntBASIC14.34□□□□□ -0.11
SOX2P48431 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.34□□□□□ -0.11
SOX2P48431 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.34□□□□□ -0.11
SOX2P48431 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX2P48431 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.34□□□□□ -0.11
SOX2P48431 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.34□□□□□ -0.11
SOX2P48431 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.34□□□□□ -0.11
SOX2P48431 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.34□□□□□ -0.11
SOX2P48431 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms