Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC3P40938 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 FAM220BP-201ENST00000377689 816 ntBASIC14.89□□□□□ -0.03
RFC3P40938 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC3P40938 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.89□□□□□ -0.03
RFC3P40938 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.89□□□□□ -0.03
RFC3P40938 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC3P40938 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RFC3P40938 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC3P40938 AC006538.1-201ENST00000567905 1585 ntBASIC14.89□□□□□ -0.03
RFC3P40938 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RFC3P40938 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.88□□□□□ -0.03
RFC3P40938 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 AC093724.1-201ENST00000448659 1027 ntBASIC14.88□□□□□ -0.03
RFC3P40938 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.88□□□□□ -0.03
RFC3P40938 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.88□□□□□ -0.03
RFC3P40938 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 LINC02560-201ENST00000596379 459 ntBASIC14.88□□□□□ -0.03
RFC3P40938 AC020765.3-201ENST00000613051 740 ntBASIC14.88□□□□□ -0.03
RFC3P40938 AL590560.3-201ENST00000623350 461 ntBASIC14.88□□□□□ -0.03
RFC3P40938 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.88□□□□□ -0.03
RFC3P40938 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFC3P40938 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.88□□□□□ -0.03
RFC3P40938 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFC3P40938 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFC3P40938 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.87□□□□□ -0.03
RFC3P40938 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.87□□□□□ -0.03
RFC3P40938 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.87□□□□□ -0.03
RFC3P40938 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFC3P40938 AC106886.4-201ENST00000623557 2502 ntBASIC14.87□□□□□ -0.03
RFC3P40938 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms