Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
USP8P40818 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.78■□□□□ 0.44
USP8P40818 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 LINC01144-201ENST00000626198 1710 ntBASIC17.78■□□□□ 0.44
USP8P40818 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP8P40818 ZNF259P1-201ENST00000407656 1365 ntBASIC17.78■□□□□ 0.44
USP8P40818 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.78■□□□□ 0.44
USP8P40818 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.77■□□□□ 0.44
USP8P40818 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.77■□□□□ 0.44
USP8P40818 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
USP8P40818 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 KRT18P2-201ENST00000447938 1258 ntBASIC17.77■□□□□ 0.44
USP8P40818 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 SLC25A1P1-201ENST00000528351 927 ntBASIC17.77■□□□□ 0.44
USP8P40818 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.77■□□□□ 0.44
USP8P40818 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.77■□□□□ 0.44
USP8P40818 AC020765.3-201ENST00000613051 740 ntBASIC17.77■□□□□ 0.44
USP8P40818 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.77■□□□□ 0.44
USP8P40818 AC004877.2-201ENST00000623941 599 ntBASIC17.77■□□□□ 0.44
USP8P40818 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
USP8P40818 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP8P40818 AC025580.3-201ENST00000617932 1424 ntBASIC17.77■□□□□ 0.44
USP8P40818 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP8P40818 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.77■□□□□ 0.43
USP8P40818 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
USP8P40818 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP8P40818 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP8P40818 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.77■□□□□ 0.43
USP8P40818 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.77■□□□□ 0.43
USP8P40818 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.77■□□□□ 0.43
USP8P40818 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP8P40818 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP8P40818 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.76■□□□□ 0.43
USP8P40818 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 AC024909.3-201ENST00000611513 2257 ntBASIC17.76■□□□□ 0.43
USP8P40818 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
USP8P40818 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.76■□□□□ 0.43
USP8P40818 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.76■□□□□ 0.43
USP8P40818 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 RHOQP3-201ENST00000437982 621 ntBASIC17.76■□□□□ 0.43
USP8P40818 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.76■□□□□ 0.43
USP8P40818 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.76■□□□□ 0.43
USP8P40818 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.76■□□□□ 0.43
USP8P40818 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.76■□□□□ 0.43
USP8P40818 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.76■□□□□ 0.43
USP8P40818 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP8P40818 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.76■□□□□ 0.43
USP8P40818 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
USP8P40818 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.75■□□□□ 0.43
USP8P40818 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 AC104640.1-201ENST00000562617 2109 ntBASIC17.75■□□□□ 0.43
USP8P40818 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms