Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HMGCLP35914 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 AL136982.4-201ENST00000437689 1740 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HMGCLP35914 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 AC004987.2-201ENST00000395959 1148 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.12■□□□□ 0.17
HMGCLP35914 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.12■□□□□ 0.17
HMGCLP35914 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.12■□□□□ 0.17
HMGCLP35914 BANF1P1-201ENST00000553684 263 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 AC004449.1-201ENST00000564240 433 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.12■□□□□ 0.17
HMGCLP35914 MIR4453-201ENST00000584019 89 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGCLP35914 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 KRT18P28-201ENST00000453838 1332 ntBASIC16.12■□□□□ 0.17
HMGCLP35914 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
HMGCLP35914 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HMGCLP35914 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.11■□□□□ 0.17
HMGCLP35914 AC011477.6-201ENST00000604980 1927 ntBASIC16.11■□□□□ 0.17
HMGCLP35914 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGCLP35914 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 AC112504.1-201ENST00000623415 1841 ntBASIC16.11■□□□□ 0.17
HMGCLP35914 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGCLP35914 CNN2P2-201ENST00000443536 909 ntBASIC16.11■□□□□ 0.17
HMGCLP35914 CNN2P3-201ENST00000450201 906 ntBASIC16.11■□□□□ 0.17
HMGCLP35914 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGCLP35914 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.11■□□□□ 0.17
HMGCLP35914 AL136317.3-201ENST00000618497 906 ntBASIC16.11■□□□□ 0.17
HMGCLP35914 AC018695.7-201ENST00000624587 2492 ntBASIC16.11■□□□□ 0.17
HMGCLP35914 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
HMGCLP35914 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGCLP35914 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMGCLP35914 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HMGCLP35914 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.11■□□□□ 0.17
HMGCLP35914 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGCLP35914 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 AC010491.1-201ENST00000563101 2797 ntBASIC16.1■□□□□ 0.17
HMGCLP35914 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HMGCLP35914 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMGCLP35914 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGCLP35914 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms