Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GDF1P27539 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.7□□□□□ -0.06
GDF1P27539 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.7□□□□□ -0.06
GDF1P27539 AL139010.1-201ENST00000454878 894 ntBASIC14.7□□□□□ -0.06
GDF1P27539 AL079307.3-201ENST00000556114 283 ntBASIC14.7□□□□□ -0.06
GDF1P27539 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.7□□□□□ -0.06
GDF1P27539 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.7□□□□□ -0.06
GDF1P27539 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.7□□□□□ -0.06
GDF1P27539 AL133215.2-201ENST00000609242 977 ntBASIC14.7□□□□□ -0.06
GDF1P27539 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 ME2P1-201ENST00000426028 1970 ntBASIC14.7□□□□□ -0.06
GDF1P27539 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.7□□□□□ -0.06
GDF1P27539 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GDF1P27539 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GDF1P27539 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.69□□□□□ -0.06
GDF1P27539 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GDF1P27539 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.69□□□□□ -0.06
GDF1P27539 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.69□□□□□ -0.06
GDF1P27539 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.69□□□□□ -0.06
GDF1P27539 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 RPL37AP1-201ENST00000412502 279 ntBASIC14.69□□□□□ -0.06
GDF1P27539 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.69□□□□□ -0.06
GDF1P27539 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.69□□□□□ -0.06
GDF1P27539 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.69□□□□□ -0.06
GDF1P27539 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.69□□□□□ -0.06
GDF1P27539 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.69□□□□□ -0.06
GDF1P27539 TEX28P1-201ENST00000613479 1221 ntBASIC14.69□□□□□ -0.06
GDF1P27539 TEX28P2-201ENST00000617764 1221 ntBASIC14.69□□□□□ -0.06
GDF1P27539 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.69□□□□□ -0.06
GDF1P27539 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.69□□□□□ -0.06
GDF1P27539 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.69□□□□□ -0.06
GDF1P27539 AL592424.1-201ENST00000563624 1536 ntBASIC14.69□□□□□ -0.06
GDF1P27539 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
GDF1P27539 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 REXO1L8P-201ENST00000604378 1897 ntBASIC14.69□□□□□ -0.06
GDF1P27539 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
GDF1P27539 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GDF1P27539 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GDF1P27539 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.69□□□□□ -0.06
GDF1P27539 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.69□□□□□ -0.06
GDF1P27539 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDF1P27539 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
GDF1P27539 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GDF1P27539 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.68□□□□□ -0.06
GDF1P27539 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDF1P27539 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GDF1P27539 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms