Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AC022145.2-201ENST00000598203 171 ntBASIC19.53■□□□□ 0.72
CHMLP26374 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.53■□□□□ 0.72
CHMLP26374 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMLP26374 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMLP26374 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHMLP26374 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMLP26374 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMLP26374 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMLP26374 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMLP26374 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMLP26374 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMLP26374 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMLP26374 RNA5SP410-201ENST00000516285 106 ntBASIC19.52■□□□□ 0.72
CHMLP26374 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.52■□□□□ 0.72
CHMLP26374 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHMLP26374 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMLP26374 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
CHMLP26374 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMLP26374 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.52■□□□□ 0.71
CHMLP26374 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
CHMLP26374 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CHMLP26374 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHMLP26374 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMLP26374 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.52■□□□□ 0.71
CHMLP26374 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHMLP26374 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMLP26374 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMLP26374 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMLP26374 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMLP26374 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMLP26374 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 IGHV3-62-201ENST00000520057 340 ntBASIC19.51■□□□□ 0.71
CHMLP26374 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMLP26374 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.51■□□□□ 0.71
CHMLP26374 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHMLP26374 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHMLP26374 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 AP3S2-216ENST00000617003 1561 ntBASIC19.51■□□□□ 0.71
CHMLP26374 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMLP26374 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CHMLP26374 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.51■□□□□ 0.71
CHMLP26374 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMLP26374 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 AL136982.4-201ENST00000437689 1740 ntBASIC19.51■□□□□ 0.71
CHMLP26374 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMLP26374 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMLP26374 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMLP26374 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMLP26374 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 BNIP3P1-202ENST00000550043 1585 ntBASIC19.5■□□□□ 0.71
CHMLP26374 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMLP26374 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms