Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 AGGF1P2-201ENST00000426656 2106 ntBASIC16.38■□□□□ 0.21
XPAP23025 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.38■□□□□ 0.21
XPAP23025 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.38■□□□□ 0.21
XPAP23025 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.38■□□□□ 0.21
XPAP23025 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.38■□□□□ 0.21
XPAP23025 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.38■□□□□ 0.21
XPAP23025 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.38■□□□□ 0.21
XPAP23025 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.38■□□□□ 0.21
XPAP23025 AC011467.4-201ENST00000594891 528 ntBASIC16.38■□□□□ 0.21
XPAP23025 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 AC007967.4-201ENST00000614700 386 ntBASIC16.38■□□□□ 0.21
XPAP23025 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.38■□□□□ 0.21
XPAP23025 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.38■□□□□ 0.21
XPAP23025 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
XPAP23025 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.38■□□□□ 0.21
XPAP23025 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
XPAP23025 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
XPAP23025 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.37■□□□□ 0.21
XPAP23025 ALOX12P2-203ENST00000570921 1945 ntBASIC16.37■□□□□ 0.21
XPAP23025 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.37■□□□□ 0.21
XPAP23025 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.37■□□□□ 0.21
XPAP23025 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.37■□□□□ 0.21
XPAP23025 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.37■□□□□ 0.21
XPAP23025 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.37■□□□□ 0.21
XPAP23025 AC093214.1-201ENST00000511688 1107 ntBASIC16.37■□□□□ 0.21
XPAP23025 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.37■□□□□ 0.21
XPAP23025 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.37■□□□□ 0.21
XPAP23025 AC026979.3-201ENST00000607315 403 ntBASIC16.37■□□□□ 0.21
XPAP23025 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.37■□□□□ 0.21
XPAP23025 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.37■□□□□ 0.21
XPAP23025 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.37■□□□□ 0.21
XPAP23025 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.37■□□□□ 0.21
XPAP23025 NORAD-201ENST00000565493 5339 ntBASIC16.37■□□□□ 0.21
XPAP23025 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.37■□□□□ 0.21
XPAP23025 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
XPAP23025 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 AL035456.1-201ENST00000456064 1369 ntBASIC16.37■□□□□ 0.21
XPAP23025 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
XPAP23025 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
XPAP23025 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
XPAP23025 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
XPAP23025 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.36■□□□□ 0.21
XPAP23025 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.36■□□□□ 0.21
XPAP23025 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.36■□□□□ 0.21
XPAP23025 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.36■□□□□ 0.21
XPAP23025 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.36■□□□□ 0.21
XPAP23025 TREML5P-201ENST00000421694 576 ntBASIC16.36■□□□□ 0.21
XPAP23025 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
XPAP23025 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.36■□□□□ 0.21
XPAP23025 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
XPAP23025 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms