Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 AC092919.2-201ENST00000623631 1645 ntBASIC15.12■□□□□ 0.01
TNFRSF1BP20333 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TNFRSF1BP20333 SSR4P1-203ENST00000599569 2260 ntBASIC15.12■□□□□ 0.01
TNFRSF1BP20333 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 CXCL1P1-201ENST00000502804 216 ntBASIC15.11■□□□□ 0.01
TNFRSF1BP20333 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 MIR4751-201ENST00000578027 74 ntBASIC15.11■□□□□ 0.01
TNFRSF1BP20333 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
TNFRSF1BP20333 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 AL513480.1-201ENST00000451731 511 ntBASIC15.1■□□□□ 0.01
TNFRSF1BP20333 AC092910.1-201ENST00000482027 1129 ntBASIC15.1■□□□□ 0.01
TNFRSF1BP20333 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 AL049840.3-201ENST00000602669 611 ntBASIC15.1■□□□□ 0.01
TNFRSF1BP20333 AC021097.1-201ENST00000607902 574 ntBASIC15.1■□□□□ 0.01
TNFRSF1BP20333 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.1■□□□□ 0.01
TNFRSF1BP20333 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms