Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.52■□□□□ 0.24
NFKB1P19838 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NFKB1P19838 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.52■□□□□ 0.24
NFKB1P19838 SPTSSB-204ENST00000617024 1292 ntBASIC16.52■□□□□ 0.24
NFKB1P19838 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.52■□□□□ 0.24
NFKB1P19838 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.52■□□□□ 0.24
NFKB1P19838 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
NFKB1P19838 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.52■□□□□ 0.24
NFKB1P19838 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NFKB1P19838 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.52■□□□□ 0.24
NFKB1P19838 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 ELL2P1-201ENST00000413990 1906 ntBASIC16.52■□□□□ 0.23
NFKB1P19838 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.52■□□□□ 0.23
NFKB1P19838 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.52■□□□□ 0.23
NFKB1P19838 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NFKB1P19838 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.52■□□□□ 0.23
NFKB1P19838 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.51■□□□□ 0.23
NFKB1P19838 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NFKB1P19838 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
NFKB1P19838 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.51■□□□□ 0.23
NFKB1P19838 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.51■□□□□ 0.23
NFKB1P19838 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 DNAJB3-201ENST00000446806 729 ntBASIC16.51■□□□□ 0.23
NFKB1P19838 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NFKB1P19838 CEND1P1-201ENST00000451006 455 ntBASIC16.51■□□□□ 0.23
NFKB1P19838 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.51■□□□□ 0.23
NFKB1P19838 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.51■□□□□ 0.23
NFKB1P19838 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 LINC01225-203ENST00000563550 1244 ntBASIC16.51■□□□□ 0.23
NFKB1P19838 AP000842.3-202ENST00000569238 1080 ntBASIC16.51■□□□□ 0.23
NFKB1P19838 AC005829.1-201ENST00000570002 483 ntBASIC16.51■□□□□ 0.23
NFKB1P19838 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.51■□□□□ 0.23
NFKB1P19838 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NFKB1P19838 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NFKB1P19838 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NFKB1P19838 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NFKB1P19838 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NFKB1P19838 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.5■□□□□ 0.23
NFKB1P19838 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.5■□□□□ 0.23
NFKB1P19838 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.5■□□□□ 0.23
NFKB1P19838 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 GPX1P2-201ENST00000429271 606 ntBASIC16.5■□□□□ 0.23
NFKB1P19838 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.5■□□□□ 0.23
NFKB1P19838 AC245100.5-201ENST00000452108 331 ntBASIC16.5■□□□□ 0.23
NFKB1P19838 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.5■□□□□ 0.23
NFKB1P19838 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.5■□□□□ 0.23
NFKB1P19838 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.5■□□□□ 0.23
NFKB1P19838 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.5■□□□□ 0.23
NFKB1P19838 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.5■□□□□ 0.23
NFKB1P19838 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.5■□□□□ 0.23
NFKB1P19838 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.5■□□□□ 0.23
NFKB1P19838 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.5■□□□□ 0.23
NFKB1P19838 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.5■□□□□ 0.23
NFKB1P19838 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.5■□□□□ 0.23
NFKB1P19838 AC010327.4-202ENST00000591484 748 ntBASIC16.5■□□□□ 0.23
NFKB1P19838 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NFKB1P19838 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms