Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC3P19447 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC3P19447 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC3P19447 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC3P19447 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC3P19447 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC3P19447 BTBD7P1-201ENST00000447253 1453 ntBASIC18.77■□□□□ 0.6
ERCC3P19447 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ERCC3P19447 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC3P19447 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
ERCC3P19447 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ERCC3P19447 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ERCC3P19447 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.77■□□□□ 0.6
ERCC3P19447 RN7SL618P-201ENST00000477850 296 ntBASIC18.77■□□□□ 0.6
ERCC3P19447 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC3P19447 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.77■□□□□ 0.6
ERCC3P19447 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC3P19447 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.77■□□□□ 0.6
ERCC3P19447 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.77■□□□□ 0.6
ERCC3P19447 AL139011.1-202ENST00000642063 584 ntBASIC18.77■□□□□ 0.6
ERCC3P19447 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.77■□□□□ 0.6
ERCC3P19447 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ERCC3P19447 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC3P19447 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC3P19447 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
ERCC3P19447 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC3P19447 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ERCC3P19447 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.76■□□□□ 0.59
ERCC3P19447 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ERCC3P19447 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ERCC3P19447 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 AL645728.1-201ENST00000366221 2101 ntBASIC18.76■□□□□ 0.59
ERCC3P19447 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC3P19447 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ERCC3P19447 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 AC007274.1-201ENST00000439805 662 ntBASIC18.76■□□□□ 0.59
ERCC3P19447 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC3P19447 AC010336.2-201ENST00000564226 506 ntBASIC18.76■□□□□ 0.59
ERCC3P19447 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
ERCC3P19447 AC004790.1-201ENST00000612686 536 ntBASIC18.76■□□□□ 0.59
ERCC3P19447 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC3P19447 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ERCC3P19447 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ERCC3P19447 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 AC008894.3-201ENST00000624324 3103 ntBASIC18.76■□□□□ 0.59
ERCC3P19447 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC3P19447 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC3P19447 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
ERCC3P19447 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.75■□□□□ 0.59
ERCC3P19447 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 AL589702.1-201ENST00000641229 1509 ntBASIC18.75■□□□□ 0.59
ERCC3P19447 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ERCC3P19447 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.75■□□□□ 0.59
ERCC3P19447 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ERCC3P19447 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ERCC3P19447 AC044860.1-202ENST00000559481 777 ntBASIC18.75■□□□□ 0.59
ERCC3P19447 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.75■□□□□ 0.59
ERCC3P19447 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.75■□□□□ 0.59
ERCC3P19447 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.75■□□□□ 0.59
ERCC3P19447 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.75■□□□□ 0.59
ERCC3P19447 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.75■□□□□ 0.59
ERCC3P19447 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC3P19447 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.75■□□□□ 0.59
ERCC3P19447 AC138969.3-201ENST00000546612 1459 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms