Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NELFEP18615 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NELFEP18615 TFAMP1-201ENST00000412727 736 ntBASIC16.11■□□□□ 0.17
NELFEP18615 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.11■□□□□ 0.17
NELFEP18615 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.11■□□□□ 0.17
NELFEP18615 HMGN1P19-201ENST00000436976 333 ntBASIC16.11■□□□□ 0.17
NELFEP18615 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.11■□□□□ 0.17
NELFEP18615 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.11■□□□□ 0.17
NELFEP18615 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.11■□□□□ 0.17
NELFEP18615 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.11■□□□□ 0.17
NELFEP18615 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.11■□□□□ 0.17
NELFEP18615 KRT8P48-201ENST00000515599 1220 ntBASIC16.11■□□□□ 0.17
NELFEP18615 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.11■□□□□ 0.17
NELFEP18615 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.11■□□□□ 0.17
NELFEP18615 AC087641.1-201ENST00000557561 1021 ntBASIC16.11■□□□□ 0.17
NELFEP18615 RARRES2P8-201ENST00000566335 367 ntBASIC16.11■□□□□ 0.17
NELFEP18615 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.11■□□□□ 0.17
NELFEP18615 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 MPDU1-223ENST00000582151 728 ntBASIC16.11■□□□□ 0.17
NELFEP18615 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.11■□□□□ 0.17
NELFEP18615 AP001350.2-201ENST00000625104 1094 ntBASIC16.11■□□□□ 0.17
NELFEP18615 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NELFEP18615 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.11■□□□□ 0.17
NELFEP18615 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFEP18615 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
NELFEP18615 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
NELFEP18615 KRT8P49-201ENST00000604166 1432 ntBASIC16.11■□□□□ 0.17
NELFEP18615 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
NELFEP18615 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
NELFEP18615 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
NELFEP18615 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 AL139400.1-201ENST00000366220 510 ntBASIC16.1■□□□□ 0.17
NELFEP18615 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.1■□□□□ 0.17
NELFEP18615 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.1■□□□□ 0.17
NELFEP18615 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.1■□□□□ 0.17
NELFEP18615 AC023141.5-201ENST00000458585 616 ntBASIC16.1■□□□□ 0.17
NELFEP18615 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.1■□□□□ 0.17
NELFEP18615 CYMP-203ENST00000474680 1263 ntBASIC16.1■□□□□ 0.17
NELFEP18615 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
NELFEP18615 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NELFEP18615 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.1■□□□□ 0.17
NELFEP18615 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NELFEP18615 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.1■□□□□ 0.17
NELFEP18615 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.1■□□□□ 0.17
NELFEP18615 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NELFEP18615 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.1■□□□□ 0.17
NELFEP18615 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NELFEP18615 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFEP18615 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.09■□□□□ 0.17
NELFEP18615 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 AC104640.1-201ENST00000562617 2109 ntBASIC16.09■□□□□ 0.17
NELFEP18615 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NELFEP18615 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 AC131009.4-201ENST00000624048 1740 ntBASIC16.09■□□□□ 0.17
NELFEP18615 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.09■□□□□ 0.17
NELFEP18615 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.09■□□□□ 0.17
NELFEP18615 AL627223.1-201ENST00000416693 442 ntBASIC16.09■□□□□ 0.17
NELFEP18615 AC092474.2-201ENST00000424288 719 ntBASIC16.09■□□□□ 0.17
NELFEP18615 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NELFEP18615 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms