Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC007064.4-201ENST00000637740 555 ntBASIC16.06■□□□□ 0.16
COL6A2P12110 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL6A2P12110 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL6A2P12110 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL6A2P12110 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL6A2P12110 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COL6A2P12110 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL6A2P12110 AC073347.1-201ENST00000421633 2643 ntBASIC16.06■□□□□ 0.16
COL6A2P12110 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.06■□□□□ 0.16
COL6A2P12110 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.06■□□□□ 0.16
COL6A2P12110 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
COL6A2P12110 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.06■□□□□ 0.16
COL6A2P12110 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COL6A2P12110 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 AC006058.4-201ENST00000624016 1670 ntBASIC16.05■□□□□ 0.16
COL6A2P12110 TSPY26P-202ENST00000565928 3884 ntBASIC16.05■□□□□ 0.16
COL6A2P12110 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 AP001282.1-201ENST00000531301 1499 ntBASIC16.05■□□□□ 0.16
COL6A2P12110 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.05■□□□□ 0.16
COL6A2P12110 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
COL6A2P12110 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.05■□□□□ 0.16
COL6A2P12110 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 AC098831.1-202ENST00000438821 336 ntBASIC16.05■□□□□ 0.16
COL6A2P12110 AC009947.1-201ENST00000444350 727 ntBASIC16.05■□□□□ 0.16
COL6A2P12110 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.05■□□□□ 0.16
COL6A2P12110 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.05■□□□□ 0.16
COL6A2P12110 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COL6A2P12110 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.05■□□□□ 0.16
COL6A2P12110 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
COL6A2P12110 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 TMBIM7P-203ENST00000641617 1718 ntBASIC16.05■□□□□ 0.16
COL6A2P12110 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.05■□□□□ 0.16
COL6A2P12110 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COL6A2P12110 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL6A2P12110 AC013268.4-201ENST00000637413 2228 ntBASIC16.04■□□□□ 0.16
COL6A2P12110 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.04■□□□□ 0.16
COL6A2P12110 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 AL589702.1-201ENST00000641229 1509 ntBASIC16.04■□□□□ 0.16
COL6A2P12110 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 C8orf49-201ENST00000525043 1968 ntBASIC16.04■□□□□ 0.16
COL6A2P12110 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
COL6A2P12110 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 AL031284.1-201ENST00000419297 478 ntBASIC16.04■□□□□ 0.16
COL6A2P12110 AC140658.5-201ENST00000438532 169 ntBASIC16.04■□□□□ 0.16
COL6A2P12110 FAAHP1-202ENST00000446499 1238 ntBASIC16.04■□□□□ 0.16
COL6A2P12110 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.04■□□□□ 0.16
COL6A2P12110 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.04■□□□□ 0.16
COL6A2P12110 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.04■□□□□ 0.16
COL6A2P12110 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
COL6A2P12110 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.04■□□□□ 0.16
COL6A2P12110 AC002347.1-201ENST00000569543 541 ntBASIC16.04■□□□□ 0.16
COL6A2P12110 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.04■□□□□ 0.16
COL6A2P12110 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
COL6A2P12110 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
COL6A2P12110 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
COL6A2P12110 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
COL6A2P12110 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL6A2P12110 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms