Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 AC026410.3-201ENST00000514280 936 ntBASIC18.27■□□□□ 0.52
PTPRFP10586 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPRFP10586 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPRFP10586 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPRFP10586 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPRFP10586 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPRFP10586 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.27■□□□□ 0.52
PTPRFP10586 AC005695.3-201ENST00000614522 232 ntBASIC18.27■□□□□ 0.52
PTPRFP10586 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPRFP10586 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPRFP10586 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PTPRFP10586 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPRFP10586 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPRFP10586 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PTPRFP10586 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPRFP10586 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPRFP10586 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPRFP10586 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.27■□□□□ 0.51
PTPRFP10586 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTPRFP10586 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PTPRFP10586 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTPRFP10586 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PTPRFP10586 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.27■□□□□ 0.51
PTPRFP10586 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.27■□□□□ 0.51
PTPRFP10586 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.27■□□□□ 0.51
PTPRFP10586 AC007551.1-201ENST00000457394 519 ntBASIC18.27■□□□□ 0.51
PTPRFP10586 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.27■□□□□ 0.51
PTPRFP10586 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
PTPRFP10586 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPRFP10586 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.27■□□□□ 0.51
PTPRFP10586 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPRFP10586 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
PTPRFP10586 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTPRFP10586 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPRFP10586 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PTPRFP10586 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 YBX1P6-201ENST00000442962 1002 ntBASIC18.26■□□□□ 0.51
PTPRFP10586 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPRFP10586 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PTPRFP10586 AP001063.1-201ENST00000568332 529 ntBASIC18.26■□□□□ 0.51
PTPRFP10586 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 AC093813.1-201ENST00000605066 256 ntBASIC18.26■□□□□ 0.51
PTPRFP10586 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPRFP10586 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPRFP10586 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
PTPRFP10586 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPRFP10586 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPRFP10586 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPRFP10586 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 GOLGA2P4-201ENST00000441462 777 ntBASIC18.25■□□□□ 0.51
PTPRFP10586 AL590640.2-201ENST00000457038 527 ntBASIC18.25■□□□□ 0.51
PTPRFP10586 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPRFP10586 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPRFP10586 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.25■□□□□ 0.51
PTPRFP10586 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
PTPRFP10586 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPRFP10586 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PTPRFP10586 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPRFP10586 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms