Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 SPDYE14P-201ENST00000442619 822 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 ALG1L8P-201ENST00000533887 760 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 DUX4L27-201ENST00000554796 1261 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 SPCS2P1-201ENST00000561636 679 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 AC005498.2-205ENST00000593218 784 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 AC013467.2-201ENST00000605472 835 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 LINC02084-201ENST00000606069 1096 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 MIR6080-201ENST00000617359 66 ntBASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMIGD3P0DMS9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AL365203.3-201ENST00000609742 2057 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 MIR346-201ENST00000362234 95 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AC107890.1-201ENST00000422478 521 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AC093214.1-201ENST00000511688 1107 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AC105233.2-201ENST00000523697 349 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AF228730.5-201ENST00000530288 346 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AL138918.1-201ENST00000568306 659 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AC051619.7-201ENST00000568314 623 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AL096865.1-201ENST00000606796 927 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 AC068418.2-201ENST00000577309 3703 ntBASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMIGD3P0DMS9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 AC005052.1-201ENST00000625181 2492 ntBASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMIGD3P0DMS9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms