Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 SPDYE7P-202ENST00000420373 878 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AL353705.2-201ENST00000428243 662 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AC245100.5-201ENST00000452108 331 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AL512356.2-201ENST00000546955 174 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 MIR4453-201ENST00000584019 89 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 Z92544.3-201ENST00000624747 417 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AC008677.1-201ENST00000519230 1561 ntBASIC15.4■□□□□ 0.06
ZNF888P0CJ79 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF888P0CJ79 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
ZNF888P0CJ79 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 MIR648-201ENST00000385046 94 ntBASIC15.39■□□□□ 0.05
ZNF888P0CJ79 HAUS4P1-201ENST00000406739 1145 ntBASIC15.39■□□□□ 0.05
ZNF888P0CJ79 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 AC069262.1-201ENST00000539058 672 ntBASIC15.39■□□□□ 0.05
ZNF888P0CJ79 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 AC025678.2-201ENST00000562061 970 ntBASIC15.39■□□□□ 0.05
ZNF888P0CJ79 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 AL391005.1-201ENST00000623953 2435 ntBASIC15.39■□□□□ 0.05
ZNF888P0CJ79 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF888P0CJ79 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF888P0CJ79 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms