Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.79■□□□□ 0.44
CLTAP09496 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.79■□□□□ 0.44
CLTAP09496 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CLTAP09496 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.79■□□□□ 0.44
CLTAP09496 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLTAP09496 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CLTAP09496 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 FAM86GP-201ENST00000448322 971 ntBASIC17.78■□□□□ 0.44
CLTAP09496 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 AC067863.1-201ENST00000494933 530 ntBASIC17.78■□□□□ 0.44
CLTAP09496 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CLTAP09496 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.78■□□□□ 0.44
CLTAP09496 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.78■□□□□ 0.44
CLTAP09496 AC018529.1-201ENST00000613063 361 ntBASIC17.78■□□□□ 0.44
CLTAP09496 AC106028.4-201ENST00000614509 607 ntBASIC17.78■□□□□ 0.44
CLTAP09496 MIR6080-201ENST00000617359 66 ntBASIC17.78■□□□□ 0.44
CLTAP09496 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CLTAP09496 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CLTAP09496 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 AC008677.1-201ENST00000519230 1561 ntBASIC17.78■□□□□ 0.44
CLTAP09496 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLTAP09496 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.78■□□□□ 0.44
CLTAP09496 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.78■□□□□ 0.44
CLTAP09496 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.78■□□□□ 0.44
CLTAP09496 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.78■□□□□ 0.44
CLTAP09496 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLTAP09496 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLTAP09496 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CLTAP09496 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.77■□□□□ 0.44
CLTAP09496 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CLTAP09496 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.77■□□□□ 0.44
CLTAP09496 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.77■□□□□ 0.44
CLTAP09496 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.77■□□□□ 0.44
CLTAP09496 CYMP-203ENST00000474680 1263 ntBASIC17.77■□□□□ 0.44
CLTAP09496 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.77■□□□□ 0.44
CLTAP09496 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.77■□□□□ 0.44
CLTAP09496 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.77■□□□□ 0.44
CLTAP09496 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CLTAP09496 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLTAP09496 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.77■□□□□ 0.44
CLTAP09496 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
CLTAP09496 U82695.1-201ENST00000635752 1889 ntBASIC17.77■□□□□ 0.43
CLTAP09496 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.77■□□□□ 0.43
CLTAP09496 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLTAP09496 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CLTAP09496 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLTAP09496 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.77■□□□□ 0.43
CLTAP09496 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.77■□□□□ 0.43
CLTAP09496 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.77■□□□□ 0.43
CLTAP09496 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
CLTAP09496 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLTAP09496 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.76■□□□□ 0.43
CLTAP09496 TUBB3P1-201ENST00000405796 1332 ntBASIC17.76■□□□□ 0.43
CLTAP09496 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLTAP09496 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.76■□□□□ 0.43
CLTAP09496 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.76■□□□□ 0.43
CLTAP09496 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.76■□□□□ 0.43
CLTAP09496 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLTAP09496 RNA5SP410-201ENST00000516285 106 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms