Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC007431.3-201ENST00000623221 587 ntBASIC19.03■□□□□ 0.64
HLA-DOAP06340 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 GK-202ENST00000378941 458 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 AP006294.1-201ENST00000415407 339 ntBASIC19.02■□□□□ 0.64
HLA-DOAP06340 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 AC092337.1-201ENST00000568699 1129 ntBASIC19.02■□□□□ 0.64
HLA-DOAP06340 AC008494.3-201ENST00000606615 944 ntBASIC19.02■□□□□ 0.64
HLA-DOAP06340 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 ME2P1-201ENST00000426028 1970 ntBASIC19.02■□□□□ 0.64
HLA-DOAP06340 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOAP06340 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOAP06340 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DOAP06340 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DOAP06340 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DOAP06340 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DOAP06340 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DOAP06340 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 AC005052.1-201ENST00000625181 2492 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 KRT8P37-201ENST00000451609 1420 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 DGCR5-201ENST00000399539 862 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 AL589987.1-201ENST00000453380 819 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 AC023310.3-201ENST00000557027 670 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 AC100756.1-201ENST00000562736 682 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 AC138749.3-201ENST00000567691 622 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 AC116165.1-201ENST00000611806 668 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 ALOX12P2-203ENST00000570921 1945 ntBASIC19.01■□□□□ 0.63
HLA-DOAP06340 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOAP06340 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DOAP06340 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOAP06340 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DOAP06340 AC092171.3-201ENST00000610122 2651 ntBASIC19■□□□□ 0.63
HLA-DOAP06340 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOAP06340 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HLA-DOAP06340 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOAP06340 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DOAP06340 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DOAP06340 EEF1DP4-201ENST00000446006 880 ntBASIC19■□□□□ 0.63
HLA-DOAP06340 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DOAP06340 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOAP06340 AC099568.2-201ENST00000609194 695 ntBASIC19■□□□□ 0.63
HLA-DOAP06340 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DOAP06340 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DOAP06340 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms