Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV3P03979 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 AC092364.2-201ENST00000596710 2692 ntBASIC12.81□□□□□ -0.36
TRGV3P03979 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
TRGV3P03979 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 AC093724.1-201ENST00000448659 1027 ntBASIC12.81□□□□□ -0.36
TRGV3P03979 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 AP000344.2-201ENST00000512987 629 ntBASIC12.81□□□□□ -0.36
TRGV3P03979 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.81□□□□□ -0.36
TRGV3P03979 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.81□□□□□ -0.36
TRGV3P03979 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 AL691403.2-201ENST00000618460 490 ntBASIC12.81□□□□□ -0.36
TRGV3P03979 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 AC105339.1-204ENST00000636249 355 ntBASIC12.81□□□□□ -0.36
TRGV3P03979 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV3P03979 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV3P03979 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV3P03979 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRGV3P03979 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.8□□□□□ -0.36
TRGV3P03979 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRGV3P03979 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRGV3P03979 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRGV3P03979 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRGV3P03979 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 AL162727.3-201ENST00000635661 2787 ntBASIC12.8□□□□□ -0.36
TRGV3P03979 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRGV3P03979 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRGV3P03979 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRGV3P03979 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV3P03979 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRGV3P03979 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TRGV3P03979 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.8□□□□□ -0.36
TRGV3P03979 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.8□□□□□ -0.36
TRGV3P03979 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV3P03979 SPCS2P4-201ENST00000436160 681 ntBASIC12.8□□□□□ -0.36
TRGV3P03979 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRGV3P03979 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.8□□□□□ -0.36
TRGV3P03979 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRGV3P03979 KRT8P23-201ENST00000560090 1207 ntBASIC12.8□□□□□ -0.36
TRGV3P03979 AL138918.1-201ENST00000568306 659 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms