Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA1P02708 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA1P02708 AC010319.3-201ENST00000597028 470 ntBASIC17.5■□□□□ 0.39
CHRNA1P02708 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHRNA1P02708 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA1P02708 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHRNA1P02708 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA1P02708 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 ALOX12P2-203ENST00000570921 1945 ntBASIC17.49■□□□□ 0.39
CHRNA1P02708 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA1P02708 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA1P02708 AC106886.4-201ENST00000623557 2502 ntBASIC17.49■□□□□ 0.39
CHRNA1P02708 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA1P02708 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CHRNA1P02708 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA1P02708 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA1P02708 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.49■□□□□ 0.39
CHRNA1P02708 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA1P02708 CROCCP4-201ENST00000457096 498 ntBASIC17.49■□□□□ 0.39
CHRNA1P02708 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.49■□□□□ 0.39
CHRNA1P02708 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA1P02708 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA1P02708 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA1P02708 MIR6775-201ENST00000617557 69 ntBASIC17.49■□□□□ 0.39
CHRNA1P02708 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA1P02708 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA1P02708 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA1P02708 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA1P02708 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHRNA1P02708 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA1P02708 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 PRORSD1P-202ENST00000563365 2154 ntBASIC17.48■□□□□ 0.39
CHRNA1P02708 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA1P02708 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA1P02708 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA1P02708 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA1P02708 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA1P02708 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA1P02708 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA1P02708 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHRNA1P02708 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA1P02708 AC036164.1-201ENST00000570544 333 ntBASIC17.48■□□□□ 0.39
CHRNA1P02708 AC015936.2-201ENST00000593177 259 ntBASIC17.48■□□□□ 0.39
CHRNA1P02708 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHRNA1P02708 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA1P02708 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA1P02708 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA1P02708 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA1P02708 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA1P02708 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHRNA1P02708 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA1P02708 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNA1P02708 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms