Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
APOA1P02647 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
APOA1P02647 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.55□□□□□ -0.08
APOA1P02647 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.55□□□□□ -0.08
APOA1P02647 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.55□□□□□ -0.08
APOA1P02647 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
APOA1P02647 MIR4651-201ENST00000582622 73 ntBASIC14.55□□□□□ -0.08
APOA1P02647 MIR4785-201ENST00000585005 73 ntBASIC14.55□□□□□ -0.08
APOA1P02647 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
APOA1P02647 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APOA1P02647 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.55□□□□□ -0.08
APOA1P02647 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.55□□□□□ -0.08
APOA1P02647 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.55□□□□□ -0.08
APOA1P02647 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APOA1P02647 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.55□□□□□ -0.08
APOA1P02647 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.55□□□□□ -0.08
APOA1P02647 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.55□□□□□ -0.08
APOA1P02647 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.55□□□□□ -0.08
APOA1P02647 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOA1P02647 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 AC003669.1-201ENST00000334569 611 ntBASIC14.54□□□□□ -0.08
APOA1P02647 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
APOA1P02647 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 ZNF444P1-201ENST00000559497 298 ntBASIC14.54□□□□□ -0.08
APOA1P02647 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.54□□□□□ -0.08
APOA1P02647 AC016027.1-202ENST00000607927 1699 ntBASIC14.54□□□□□ -0.08
APOA1P02647 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 AC020658.6-201ENST00000623564 1870 ntBASIC14.54□□□□□ -0.08
APOA1P02647 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.54□□□□□ -0.08
APOA1P02647 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOA1P02647 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
APOA1P02647 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA1P02647 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.53□□□□□ -0.08
APOA1P02647 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
APOA1P02647 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA1P02647 AC007686.3-201ENST00000619017 3487 ntBASIC14.53□□□□□ -0.08
APOA1P02647 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA1P02647 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
APOA1P02647 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.53□□□□□ -0.08
APOA1P02647 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA1P02647 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.53□□□□□ -0.08
APOA1P02647 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.53□□□□□ -0.08
APOA1P02647 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOA1P02647 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.53□□□□□ -0.08
APOA1P02647 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.53□□□□□ -0.08
APOA1P02647 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
APOA1P02647 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOA1P02647 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms