Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.78■□□□□ 0.12
LDLRP01130 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.78■□□□□ 0.12
LDLRP01130 AL353593.2-201ENST00000602529 1483 ntBASIC15.78■□□□□ 0.12
LDLRP01130 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.78■□□□□ 0.12
LDLRP01130 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
LDLRP01130 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LDLRP01130 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.77■□□□□ 0.12
LDLRP01130 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.77■□□□□ 0.12
LDLRP01130 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LDLRP01130 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LDLRP01130 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.77■□□□□ 0.12
LDLRP01130 CRYGEP-201ENST00000412192 528 ntBASIC15.77■□□□□ 0.12
LDLRP01130 BCRP1-201ENST00000444246 691 ntBASIC15.77■□□□□ 0.12
LDLRP01130 CEND1P1-201ENST00000451006 455 ntBASIC15.77■□□□□ 0.12
LDLRP01130 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.77■□□□□ 0.12
LDLRP01130 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.77■□□□□ 0.12
LDLRP01130 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LDLRP01130 AC027612.4-201ENST00000605371 583 ntBASIC15.77■□□□□ 0.12
LDLRP01130 AC073592.4-201ENST00000623827 446 ntBASIC15.77■□□□□ 0.12
LDLRP01130 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
LDLRP01130 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
LDLRP01130 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LDLRP01130 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.77■□□□□ 0.11
LDLRP01130 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LDLRP01130 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
LDLRP01130 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
LDLRP01130 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LDLRP01130 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.77■□□□□ 0.11
LDLRP01130 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.77■□□□□ 0.11
LDLRP01130 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LDLRP01130 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.77■□□□□ 0.11
LDLRP01130 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LDLRP01130 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.76■□□□□ 0.11
LDLRP01130 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.76■□□□□ 0.11
LDLRP01130 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.76■□□□□ 0.11
LDLRP01130 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LDLRP01130 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.76■□□□□ 0.11
LDLRP01130 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.76■□□□□ 0.11
LDLRP01130 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
LDLRP01130 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.76■□□□□ 0.11
LDLRP01130 DUX4L17-201ENST00000557360 1267 ntBASIC15.76■□□□□ 0.11
LDLRP01130 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.76■□□□□ 0.11
LDLRP01130 AL513190.1-201ENST00000621254 727 ntBASIC15.76■□□□□ 0.11
LDLRP01130 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
LDLRP01130 AC093028.1-201ENST00000622998 982 ntBASIC15.76■□□□□ 0.11
LDLRP01130 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.76■□□□□ 0.11
LDLRP01130 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LDLRP01130 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.76■□□□□ 0.11
LDLRP01130 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LDLRP01130 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.76■□□□□ 0.11
LDLRP01130 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms