Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 KRT18P28-201ENST00000453838 1332 ntBASIC16.32■□□□□ 0.2
RFPL1O75677 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RFPL1O75677 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.32■□□□□ 0.2
RFPL1O75677 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.32■□□□□ 0.2
RFPL1O75677 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RFPL1O75677 SSR4P1-203ENST00000599569 2260 ntBASIC16.32■□□□□ 0.2
RFPL1O75677 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.32■□□□□ 0.2
RFPL1O75677 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RFPL1O75677 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFPL1O75677 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.32■□□□□ 0.2
RFPL1O75677 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
RFPL1O75677 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RFPL1O75677 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 METTL21AP1-201ENST00000438852 635 ntBASIC16.31■□□□□ 0.2
RFPL1O75677 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.31■□□□□ 0.2
RFPL1O75677 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.31■□□□□ 0.2
RFPL1O75677 MIR4751-201ENST00000578027 74 ntBASIC16.31■□□□□ 0.2
RFPL1O75677 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFPL1O75677 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
RFPL1O75677 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFPL1O75677 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFPL1O75677 TSPY26P-202ENST00000565928 3884 ntBASIC16.3■□□□□ 0.2
RFPL1O75677 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.3■□□□□ 0.2
RFPL1O75677 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.3■□□□□ 0.2
RFPL1O75677 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 TNRC18P2-201ENST00000417666 2714 ntBASIC16.3■□□□□ 0.2
RFPL1O75677 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.3■□□□□ 0.2
RFPL1O75677 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.3■□□□□ 0.2
RFPL1O75677 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.3■□□□□ 0.2
RFPL1O75677 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.3■□□□□ 0.2
RFPL1O75677 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.3■□□□□ 0.2
RFPL1O75677 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.3■□□□□ 0.2
RFPL1O75677 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.3■□□□□ 0.2
RFPL1O75677 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.3■□□□□ 0.2
RFPL1O75677 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.3■□□□□ 0.2
RFPL1O75677 ACTL9-202ENST00000612068 1252 ntBASIC16.3■□□□□ 0.2
RFPL1O75677 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFPL1O75677 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RFPL1O75677 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RFPL1O75677 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.3■□□□□ 0.2
RFPL1O75677 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RFPL1O75677 AC136621.1-201ENST00000624017 2304 ntBASIC16.3■□□□□ 0.2
RFPL1O75677 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms