Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH16O75309 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CDH16O75309 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH16O75309 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH16O75309 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH16O75309 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH16O75309 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH16O75309 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH16O75309 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH16O75309 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH16O75309 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH16O75309 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH16O75309 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDH16O75309 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH16O75309 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH16O75309 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH16O75309 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 HAUS4P1-201ENST00000406739 1145 ntBASIC16.44■□□□□ 0.22
CDH16O75309 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH16O75309 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
CDH16O75309 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH16O75309 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH16O75309 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH16O75309 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH16O75309 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH16O75309 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH16O75309 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH16O75309 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH16O75309 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDH16O75309 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 AC011477.6-201ENST00000604980 1927 ntBASIC16.43■□□□□ 0.22
CDH16O75309 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH16O75309 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH16O75309 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms