Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 LINC02447-202ENST00000501888 2146 ntBASIC16.4■□□□□ 0.22
PRAMEF11O60813 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 AC134407.2-201ENST00000625089 1978 ntBASIC16.4■□□□□ 0.22
PRAMEF11O60813 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 BNIP3P1-202ENST00000550043 1585 ntBASIC16.4■□□□□ 0.22
PRAMEF11O60813 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 SPDYE17-201ENST00000412399 783 ntBASIC16.4■□□□□ 0.22
PRAMEF11O60813 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 AL079307.3-201ENST00000556114 283 ntBASIC16.4■□□□□ 0.22
PRAMEF11O60813 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 AC106028.4-201ENST00000614509 607 ntBASIC16.4■□□□□ 0.22
PRAMEF11O60813 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF11O60813 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF11O60813 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PRAMEF11O60813 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PRAMEF11O60813 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 CETN4P-206ENST00000642099 2168 ntBASIC16.39■□□□□ 0.21
PRAMEF11O60813 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 HLA-V-204ENST00000476601 1289 ntBASIC16.39■□□□□ 0.21
PRAMEF11O60813 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 AC069120.2-201ENST00000524091 540 ntBASIC16.39■□□□□ 0.21
PRAMEF11O60813 DUX4L27-201ENST00000554796 1261 ntBASIC16.39■□□□□ 0.21
PRAMEF11O60813 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 AL589739.1-201ENST00000607720 493 ntBASIC16.39■□□□□ 0.21
PRAMEF11O60813 SPDYE12P-201ENST00000618416 771 ntBASIC16.39■□□□□ 0.21
PRAMEF11O60813 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PRAMEF11O60813 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.39■□□□□ 0.21
PRAMEF11O60813 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF11O60813 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEF11O60813 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEF11O60813 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.38■□□□□ 0.21
PRAMEF11O60813 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.38■□□□□ 0.21
PRAMEF11O60813 AC112504.1-201ENST00000623415 1841 ntBASIC16.38■□□□□ 0.21
PRAMEF11O60813 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEF11O60813 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PRAMEF11O60813 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRAMEF11O60813 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms