Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LCMT2O60294 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LCMT2O60294 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LCMT2O60294 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.52■□□□□ 0.08
LCMT2O60294 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.52■□□□□ 0.08
LCMT2O60294 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LCMT2O60294 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.52■□□□□ 0.08
LCMT2O60294 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.52■□□□□ 0.08
LCMT2O60294 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.52■□□□□ 0.08
LCMT2O60294 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
LCMT2O60294 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.52■□□□□ 0.08
LCMT2O60294 AC018529.1-201ENST00000613063 361 ntBASIC15.52■□□□□ 0.08
LCMT2O60294 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LCMT2O60294 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LCMT2O60294 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LCMT2O60294 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LCMT2O60294 AC024909.3-201ENST00000611513 2257 ntBASIC15.52■□□□□ 0.07
LCMT2O60294 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LCMT2O60294 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LCMT2O60294 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LCMT2O60294 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
LCMT2O60294 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.51■□□□□ 0.07
LCMT2O60294 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
LCMT2O60294 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 AC008677.1-201ENST00000519230 1561 ntBASIC15.51■□□□□ 0.07
LCMT2O60294 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.51■□□□□ 0.07
LCMT2O60294 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.51■□□□□ 0.07
LCMT2O60294 AL603832.2-201ENST00000566195 2125 ntBASIC15.51■□□□□ 0.07
LCMT2O60294 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.51■□□□□ 0.07
LCMT2O60294 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 AC010491.1-201ENST00000563101 2797 ntBASIC15.51■□□□□ 0.07
LCMT2O60294 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.51■□□□□ 0.07
LCMT2O60294 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCMT2O60294 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LCMT2O60294 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
LCMT2O60294 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.5■□□□□ 0.07
LCMT2O60294 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LCMT2O60294 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
LCMT2O60294 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LCMT2O60294 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 KRT18P28-201ENST00000453838 1332 ntBASIC15.5■□□□□ 0.07
LCMT2O60294 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.5■□□□□ 0.07
LCMT2O60294 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.5■□□□□ 0.07
LCMT2O60294 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LCMT2O60294 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCMT2O60294 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.5■□□□□ 0.07
LCMT2O60294 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.5■□□□□ 0.07
LCMT2O60294 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms