Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRKNO60260 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PRKNO60260 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKNO60260 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PRKNO60260 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKNO60260 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 AC067863.1-201ENST00000494933 530 ntBASIC15.1■□□□□ 0.01
PRKNO60260 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.1■□□□□ 0.01
PRKNO60260 BANF1P1-201ENST00000553684 263 ntBASIC15.1■□□□□ 0.01
PRKNO60260 AC061975.2-201ENST00000581722 295 ntBASIC15.1■□□□□ 0.01
PRKNO60260 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.1■□□□□ 0.01
PRKNO60260 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKNO60260 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKNO60260 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PRKNO60260 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PRKNO60260 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKNO60260 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKNO60260 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.1■□□□□ 0.01
PRKNO60260 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
PRKNO60260 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 TREML5P-201ENST00000421694 576 ntBASIC15.09■□□□□ 0.01
PRKNO60260 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 POU5F1P6-201ENST00000466990 990 ntBASIC15.09■□□□□ 0.01
PRKNO60260 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.09■□□□□ 0.01
PRKNO60260 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 AC006449.6-201ENST00000612330 2296 ntBASIC15.09■□□□□ 0.01
PRKNO60260 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 FO538757.1-201ENST00000623083 1397 ntBASIC15.09■□□□□ 0.01
PRKNO60260 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PRKNO60260 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
PRKNO60260 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKNO60260 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
PRKNO60260 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PRKNO60260 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.08■□□□□ 0.01
PRKNO60260 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRKNO60260 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRKNO60260 AC008894.3-201ENST00000624324 3103 ntBASIC15.08■□□□□ 0.01
PRKNO60260 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PRKNO60260 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.08■□□□□ 0
PRKNO60260 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRKNO60260 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.08■□□□□ 0
PRKNO60260 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRKNO60260 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRKNO60260 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PRKNO60260 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRKNO60260 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
PRKNO60260 AL596087.1-201ENST00000400979 1969 ntBASIC15.08■□□□□ 0
PRKNO60260 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRKNO60260 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRKNO60260 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms