Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC28A2O43868 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SLC28A2O43868 RBPMS2P1-201ENST00000437762 623 ntBASIC15.7■□□□□ 0.1
SLC28A2O43868 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC28A2O43868 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.7■□□□□ 0.1
SLC28A2O43868 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC28A2O43868 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 PI4KAP1-204ENST00000612579 1703 ntBASIC15.7■□□□□ 0.1
SLC28A2O43868 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 TOP3BP1-201ENST00000420768 1380 ntBASIC15.7■□□□□ 0.1
SLC28A2O43868 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SLC28A2O43868 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC28A2O43868 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SLC28A2O43868 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A2O43868 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 CU639417.3-201ENST00000624240 1404 ntBASIC15.69■□□□□ 0.1
SLC28A2O43868 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 AC011270.2-201ENST00000624293 2550 ntBASIC15.69■□□□□ 0.1
SLC28A2O43868 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC28A2O43868 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 RN7SL589P-201ENST00000481268 310 ntBASIC15.69■□□□□ 0.1
SLC28A2O43868 AC079140.1-201ENST00000508039 487 ntBASIC15.69■□□□□ 0.1
SLC28A2O43868 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC28A2O43868 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 AL158211.3-201ENST00000607385 239 ntBASIC15.69■□□□□ 0.1
SLC28A2O43868 AC004233.3-201ENST00000607794 1269 ntBASIC15.69■□□□□ 0.1
SLC28A2O43868 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC28A2O43868 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SLC28A2O43868 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC28A2O43868 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC28A2O43868 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC28A2O43868 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 AC063926.3-201ENST00000624734 5658 ntBASIC15.68■□□□□ 0.1
SLC28A2O43868 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC28A2O43868 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC28A2O43868 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC28A2O43868 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms