Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.2■□□□□ 0.02
FOXS1O43638 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXS1O43638 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 AC010336.2-201ENST00000564226 506 ntBASIC15.2■□□□□ 0.02
FOXS1O43638 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXS1O43638 AL033527.5-202ENST00000641632 1098 ntBASIC15.2■□□□□ 0.02
FOXS1O43638 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXS1O43638 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXS1O43638 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXS1O43638 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
FOXS1O43638 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXS1O43638 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.2■□□□□ 0.02
FOXS1O43638 AC134407.2-201ENST00000625089 1978 ntBASIC15.2■□□□□ 0.02
FOXS1O43638 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXS1O43638 AP001282.1-201ENST00000531301 1499 ntBASIC15.2■□□□□ 0.02
FOXS1O43638 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FOXS1O43638 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXS1O43638 AC022144.1-201ENST00000602255 1580 ntBASIC15.19■□□□□ 0.02
FOXS1O43638 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
FOXS1O43638 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
FOXS1O43638 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXS1O43638 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
FOXS1O43638 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXS1O43638 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 MIR661-201ENST00000384842 89 ntBASIC15.19■□□□□ 0.02
FOXS1O43638 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.19■□□□□ 0.02
FOXS1O43638 FAM8A3P-201ENST00000427218 844 ntBASIC15.19■□□□□ 0.02
FOXS1O43638 EEF1DP4-201ENST00000446006 880 ntBASIC15.19■□□□□ 0.02
FOXS1O43638 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXS1O43638 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.19■□□□□ 0.02
FOXS1O43638 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.19■□□□□ 0.02
FOXS1O43638 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FOXS1O43638 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXS1O43638 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
FOXS1O43638 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
FOXS1O43638 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FOXS1O43638 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FOXS1O43638 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.19■□□□□ 0.02
FOXS1O43638 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
FOXS1O43638 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
FOXS1O43638 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXS1O43638 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXS1O43638 KRT8P37-201ENST00000451609 1420 ntBASIC15.18■□□□□ 0.02
FOXS1O43638 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.18■□□□□ 0.02
FOXS1O43638 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
FOXS1O43638 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXS1O43638 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
FOXS1O43638 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXS1O43638 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXS1O43638 SERBP1P3-201ENST00000459980 809 ntBASIC15.18■□□□□ 0.02
FOXS1O43638 RN7SL618P-201ENST00000477850 296 ntBASIC15.18■□□□□ 0.02
FOXS1O43638 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms