Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 AC097637.2-201ENST00000624096 1997 ntBASIC15.55■□□□□ 0.08
PDLIM1O00151 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 KRT8P49-201ENST00000604166 1432 ntBASIC15.55■□□□□ 0.08
PDLIM1O00151 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 EMBP1-201ENST00000458200 901 ntBASIC15.55■□□□□ 0.08
PDLIM1O00151 AC106795.1-205ENST00000512851 1056 ntBASIC15.55■□□□□ 0.08
PDLIM1O00151 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PDLIM1O00151 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.55■□□□□ 0.08
PDLIM1O00151 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.55■□□□□ 0.08
PDLIM1O00151 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.55■□□□□ 0.08
PDLIM1O00151 AC013467.2-201ENST00000605472 835 ntBASIC15.55■□□□□ 0.08
PDLIM1O00151 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 AC041040.2-201ENST00000622926 2899 ntBASIC15.55■□□□□ 0.08
PDLIM1O00151 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PDLIM1O00151 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.54■□□□□ 0.08
PDLIM1O00151 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.54■□□□□ 0.08
PDLIM1O00151 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.54■□□□□ 0.08
PDLIM1O00151 AC026396.1-201ENST00000419388 421 ntBASIC15.54■□□□□ 0.08
PDLIM1O00151 ABCD1P5-201ENST00000445663 754 ntBASIC15.54■□□□□ 0.08
PDLIM1O00151 FAAHP1-202ENST00000446499 1238 ntBASIC15.54■□□□□ 0.08
PDLIM1O00151 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.54■□□□□ 0.08
PDLIM1O00151 SAPCD2P3-201ENST00000455031 850 ntBASIC15.54■□□□□ 0.08
PDLIM1O00151 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.54■□□□□ 0.08
PDLIM1O00151 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.54■□□□□ 0.08
PDLIM1O00151 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.54■□□□□ 0.08
PDLIM1O00151 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PDLIM1O00151 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.54■□□□□ 0.08
PDLIM1O00151 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.54■□□□□ 0.08
PDLIM1O00151 AD001527.2-201ENST00000622994 785 ntBASIC15.54■□□□□ 0.08
PDLIM1O00151 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 CICP20-201ENST00000443330 2801 ntBASIC15.54■□□□□ 0.08
PDLIM1O00151 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.54■□□□□ 0.08
PDLIM1O00151 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
PDLIM1O00151 AC010327.5-201ENST00000586923 3061 ntBASIC15.54■□□□□ 0.08
PDLIM1O00151 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDLIM1O00151 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDLIM1O00151 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDLIM1O00151 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PDLIM1O00151 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms