Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC092384.3-202ENST00000564646 2873 ntBASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 SLC22A20-204ENST00000530038 1673 ntBASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC005225.4-201ENST00000557330 545 ntBASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 AL035252.4-201ENST00000624174 288 ntBASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMX2-CTNND1H3BSU7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC016027.1-202ENST00000607927 1699 ntBASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC012645.4-201ENST00000610691 1061 ntBASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC018529.1-201ENST00000613063 361 ntBASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC009118.2-201ENST00000613275 655 ntBASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.99■□□□□ 0.15
TMX2-CTNND1H3BSU7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 MIR4453-201ENST00000584019 89 ntBASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 AC073592.8-201ENST00000624126 511 ntBASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMX2-CTNND1H3BSU7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms