Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM88BA6NKF7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 KRT18P66-201ENST00000452970 1269 ntBASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 AC024681.1-201ENST00000521917 487 ntBASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 AC015910.1-201ENST00000579400 975 ntBASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM88BA6NKF7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AC005622.1-201ENST00000636801 1703 ntBASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AC243562.2-201ENST00000561247 970 ntBASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AL354989.2-201ENST00000435838 1540 ntBASIC18.52■□□□□ 0.56
TMEM88BA6NKF7 AC008132.1-202ENST00000342005 1389 ntBASIC18.52■□□□□ 0.55
TMEM88BA6NKF7 AL391256.1-201ENST00000443260 1855 ntBASIC18.52■□□□□ 0.55
TMEM88BA6NKF7 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM88BA6NKF7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM88BA6NKF7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM88BA6NKF7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TMEM88BA6NKF7 AL023775.1-201ENST00000454907 1746 ntBASIC18.52■□□□□ 0.55
TMEM88BA6NKF7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 KRT8P35-201ENST00000483942 1338 ntBASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 PCDHB17P-201ENST00000539533 2393 ntBASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 AC079178.1-201ENST00000420915 656 ntBASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms