Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 AC098859.1-201ENST00000502915 1238 ntBASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 RN7SL828P-201ENST00000607615 303 ntBASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 AL589739.1-201ENST00000607720 493 ntBASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 AC078925.2-201ENST00000624013 1973 ntBASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 AC008741.2-201ENST00000612792 3115 ntBASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PCDHGA9Q9Y5G4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 HYMAI-201ENST00000635591 3347 ntBASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AC098614.1-201ENST00000368528 745 ntBASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF890P-202ENST00000530367 1156 ntBASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AC009407.1-201ENST00000568958 598 ntBASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AL844908.2-201ENST00000609461 460 ntBASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGA9Q9Y5G4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms