Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RCL1Q9Y2P8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 TERF1P1-201ENST00000311003 1181 ntBASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 AC087499.1-201ENST00000418141 1075 ntBASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 AL353135.1-201ENST00000606729 504 ntBASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 PGM5P2-202ENST00000637225 1043 ntBASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RCL1Q9Y2P8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC087481.3-201ENST00000602886 1894 ntBASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC073592.4-201ENST00000623827 446 ntBASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AC026748.1-201ENST00000624349 3251 ntBASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms