Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 AL139400.1-201ENST00000366220 510 ntBASIC20.58■□□□□ 0.89
TNNQ9UQP3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 FAM220BP-201ENST00000377689 816 ntBASIC20.58■□□□□ 0.89
TNNQ9UQP3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 SPDYE14P-201ENST00000442619 822 ntBASIC20.58■□□□□ 0.89
TNNQ9UQP3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.58■□□□□ 0.89
TNNQ9UQP3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNNQ9UQP3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNQ9UQP3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TNNQ9UQP3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.58■□□□□ 0.88
TNNQ9UQP3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNQ9UQP3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TNNQ9UQP3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TNNQ9UQP3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.58■□□□□ 0.88
TNNQ9UQP3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNQ9UQP3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNQ9UQP3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 CICP13-201ENST00000422015 2789 ntBASIC20.57■□□□□ 0.88
TNNQ9UQP3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 RPS8P6-201ENST00000426177 609 ntBASIC20.57■□□□□ 0.88
TNNQ9UQP3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 KRT8P23-201ENST00000560090 1207 ntBASIC20.57■□□□□ 0.88
TNNQ9UQP3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 MIR3687-2-201ENST00000577708 61 ntBASIC20.57■□□□□ 0.88
TNNQ9UQP3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 MIR3687-1-201ENST00000614492 61 ntBASIC20.57■□□□□ 0.88
TNNQ9UQP3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNQ9UQP3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TNNQ9UQP3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 AC092850.2-201ENST00000623821 2697 ntBASIC20.56■□□□□ 0.88
TNNQ9UQP3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 BNIP3P1-202ENST00000550043 1585 ntBASIC20.56■□□□□ 0.88
TNNQ9UQP3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 KRT18P13-201ENST00000400056 1290 ntBASIC20.56■□□□□ 0.88
TNNQ9UQP3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 KRT18P32-201ENST00000424695 1287 ntBASIC20.56■□□□□ 0.88
TNNQ9UQP3 DNAJB3-202ENST00000449667 1266 ntBASIC20.56■□□□□ 0.88
TNNQ9UQP3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.56■□□□□ 0.88
TNNQ9UQP3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 RARRES2P9-201ENST00000565168 469 ntBASIC20.56■□□□□ 0.88
TNNQ9UQP3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TNNQ9UQP3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNQ9UQP3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms