Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 COX11-210ENST00000639671 696 ntBASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.29■□□□□ 0.68
HPS5Q9UPZ3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 REXO1L8P-201ENST00000604378 1897 ntBASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 HLA-V-204ENST00000476601 1289 ntBASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HPS5Q9UPZ3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 DFFBP1-201ENST00000433250 979 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 KRT223P-202ENST00000449164 1292 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 POU5F1P6-201ENST00000466990 990 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 AC005622.1-201ENST00000636801 1703 ntBASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS5Q9UPZ3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
HPS5Q9UPZ3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms