Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL139011.1-202ENST00000642063 584 ntBASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZC3H4Q9UPT8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 AL355312.1-201ENST00000407115 2176 ntBASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 C2orf27AP3-201ENST00000434123 579 ntBASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 AL591846.1-201ENST00000451736 433 ntBASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 AC106760.1-201ENST00000508690 800 ntBASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 AC120045.2-201ENST00000567334 178 ntBASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 AL354718.3-201ENST00000616414 581 ntBASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 CR382287.1-201ENST00000623954 586 ntBASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZC3H4Q9UPT8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
ZC3H4Q9UPT8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 AC007969.1-201ENST00000433675 447 ntBASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 RPS2P36-201ENST00000456516 831 ntBASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 RN7SL769P-201ENST00000469386 295 ntBASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 GNRHR2-203ENST00000581100 1187 ntBASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 AL049840.4-201ENST00000602422 811 ntBASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZC3H4Q9UPT8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 C1QBPP1-201ENST00000400117 770 ntBASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 BTBD6P1-201ENST00000412176 1267 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms