Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AC008687.7-202ENST00000637404 953 ntBASIC19.27■□□□□ 0.68
ZNRF3Q9ULT6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNRF3Q9ULT6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNRF3Q9ULT6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNRF3Q9ULT6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNRF3Q9ULT6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNRF3Q9ULT6 NOC2LP2-201ENST00000407594 1944 ntBASIC19.27■□□□□ 0.67
ZNRF3Q9ULT6 BNIP3P1-202ENST00000550043 1585 ntBASIC19.27■□□□□ 0.67
ZNRF3Q9ULT6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNRF3Q9ULT6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNRF3Q9ULT6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AC018470.1-201ENST00000624790 3129 ntBASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 AL592424.1-201ENST00000563624 1536 ntBASIC19.25■□□□□ 0.67
ZNRF3Q9ULT6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 AC006033.1-201ENST00000440505 426 ntBASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 POU5F1P6-201ENST00000466990 990 ntBASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 SLED1-202ENST00000512051 380 ntBASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms