Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 C1QBPP1-201ENST00000400117 770 ntBASIC20.49■□□□□ 0.87
SCN11AQ9UI33 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN11AQ9UI33 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 DRD5P1-201ENST00000456605 1438 ntBASIC20.48■□□□□ 0.87
SCN11AQ9UI33 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 CLUHP6-201ENST00000580789 941 ntBASIC20.48■□□□□ 0.87
SCN11AQ9UI33 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN11AQ9UI33 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 AL606495.2-201ENST00000605867 535 ntBASIC20.47■□□□□ 0.87
SCN11AQ9UI33 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN11AQ9UI33 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 MIR4525-201ENST00000580000 75 ntBASIC20.46■□□□□ 0.87
SCN11AQ9UI33 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AC012313.1-201ENST00000593393 3059 ntBASIC20.46■□□□□ 0.87
SCN11AQ9UI33 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 RNU1-114P-201ENST00000365297 166 ntBASIC20.46■□□□□ 0.87
SCN11AQ9UI33 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 BAATP1-201ENST00000412284 1225 ntBASIC20.46■□□□□ 0.87
SCN11AQ9UI33 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AC026410.3-201ENST00000514280 936 ntBASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN11AQ9UI33 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
SCN11AQ9UI33 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms