Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 NHP2-202ENST00000314397 599 ntTSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 GHSR-202ENST00000427970 912 ntBASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 ALG1L6P-201ENST00000515248 758 ntBASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 AC105137.3-201ENST00000617588 984 ntBASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 PCBP2-OT1-201ENST00000634357 590 ntBASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 KLF2P2-201ENST00000416807 1039 ntBASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 CAP2P1-201ENST00000557743 1390 ntBASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 AC020916.1-201ENST00000587762 1774 ntBASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 AC090857.1-201ENST00000527400 390 ntBASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 MIR6816-201ENST00000620368 66 ntBASIC25.01■■□□□ 1.59
RIMBP3Q9UFD9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 AC136604.1-201ENST00000418535 575 ntBASIC25■■□□□ 1.59
RIMBP3Q9UFD9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 AC021723.1-201ENST00000486306 515 ntBASIC25■■□□□ 1.59
RIMBP3Q9UFD9 RN7SL67P-201ENST00000492147 296 ntBASIC25■■□□□ 1.59
RIMBP3Q9UFD9 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 ENPP7P14-201ENST00000621765 1040 ntBASIC25■■□□□ 1.59
RIMBP3Q9UFD9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC25■■□□□ 1.59
RIMBP3Q9UFD9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 AC011247.3-201ENST00000603297 438 ntBASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
RIMBP3Q9UFD9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 CHMP1AP1-201ENST00000445563 662 ntBASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 TUBB8P8-201ENST00000458717 1058 ntBASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 AC243562.2-201ENST00000561247 970 ntBASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 MIR4783-201ENST00000580343 82 ntBASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms