Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 POU5F1P6-201ENST00000466990 990 ntBASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 PRYP6-201ENST00000514804 343 ntBASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 AC006538.3-201ENST00000612495 578 ntBASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 AC084121.4-201ENST00000641598 221 ntBASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 AF228730.8-201ENST00000642140 221 ntBASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 PAUPAR-201ENST00000630360 2965 ntBASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AC004461.1-201ENST00000412461 403 ntBASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AC093724.1-201ENST00000448659 1027 ntBASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AC105233.2-201ENST00000523697 349 ntBASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AF228730.5-201ENST00000530288 346 ntBASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AC027307.2-201ENST00000591252 911 ntBASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AC079781.4-201ENST00000641908 219 ntBASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PPARGC1AQ9UBK2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 MIR346-201ENST00000362234 95 ntBASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AL592309.1-201ENST00000443127 649 ntBASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PPARGC1AQ9UBK2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms