Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 FAM86MP-201ENST00000340703 885 ntBASIC17.13■□□□□ 0.33
TLR9Q9NR96 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 AC004945.1-201ENST00000416738 983 ntBASIC17.13■□□□□ 0.33
TLR9Q9NR96 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 PCGF3-213ENST00000620529 1899 ntBASIC17.13■□□□□ 0.33
TLR9Q9NR96 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.13■□□□□ 0.33
TLR9Q9NR96 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR9Q9NR96 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.12■□□□□ 0.33
TLR9Q9NR96 BNIP3P42-201ENST00000454982 569 ntBASIC17.12■□□□□ 0.33
TLR9Q9NR96 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 MIR4321-201ENST00000592276 80 ntBASIC17.12■□□□□ 0.33
TLR9Q9NR96 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 BNIP3P29-201ENST00000598302 571 ntBASIC17.12■□□□□ 0.33
TLR9Q9NR96 AC011447.5-201ENST00000616168 564 ntBASIC17.12■□□□□ 0.33
TLR9Q9NR96 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TLR9Q9NR96 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR9Q9NR96 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 ANKRD19P-201ENST00000338192 862 ntBASIC17.11■□□□□ 0.33
TLR9Q9NR96 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 USP32P1-208ENST00000506594 1164 ntBASIC17.11■□□□□ 0.33
TLR9Q9NR96 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR9Q9NR96 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TLR9Q9NR96 U82695.1-201ENST00000635752 1889 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms