Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 AC092364.2-201ENST00000596710 2692 ntBASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 AP002414.1-201ENST00000391405 1147 ntBASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 AL031133.1-201ENST00000406807 723 ntBASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 TOB2P1-201ENST00000469761 992 ntBASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 AP000867.4-201ENST00000641616 219 ntBASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C12orf4Q9NQ89 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 SIGLEC16-201ENST00000599858 1437 ntBASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 RCN1P2-201ENST00000398357 915 ntBASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 TPSP2-201ENST00000561760 610 ntBASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 KRT8P49-201ENST00000604166 1432 ntBASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C12orf4Q9NQ89 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C12orf4Q9NQ89 AC010327.5-201ENST00000586923 3061 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms