Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AC093512.1-201ENST00000617969 520 ntBASIC17.15■□□□□ 0.34
CD248Q9HCU0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CD248Q9HCU0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CD248Q9HCU0 SNX18-202ENST00000343017 3140 ntBASIC17.14■□□□□ 0.34
CD248Q9HCU0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 BCRP1-201ENST00000444246 691 ntBASIC17.14■□□□□ 0.33
CD248Q9HCU0 TIMM8BP1-201ENST00000452384 211 ntBASIC17.14■□□□□ 0.33
CD248Q9HCU0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 FAM86C2P-203ENST00000528684 1004 ntBASIC17.14■□□□□ 0.33
CD248Q9HCU0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 AC078925.2-201ENST00000624013 1973 ntBASIC17.14■□□□□ 0.33
CD248Q9HCU0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD248Q9HCU0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
CD248Q9HCU0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 AC079140.1-201ENST00000508039 487 ntBASIC17.13■□□□□ 0.33
CD248Q9HCU0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 AC025678.2-201ENST00000562061 970 ntBASIC17.13■□□□□ 0.33
CD248Q9HCU0 AC005498.2-205ENST00000593218 784 ntBASIC17.13■□□□□ 0.33
CD248Q9HCU0 AL390955.2-201ENST00000603032 514 ntBASIC17.13■□□□□ 0.33
CD248Q9HCU0 AL096865.1-201ENST00000606796 927 ntBASIC17.13■□□□□ 0.33
CD248Q9HCU0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CD248Q9HCU0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD248Q9HCU0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms