Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
NDUFAF3Q9BU61 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 LINC02012-201ENST00000608206 1725 ntBASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 KRT8P10-201ENST00000450021 1447 ntBASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 IGHV3-47-201ENST00000425060 335 ntBASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 EMBP1-201ENST00000458200 901 ntBASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AL353801.3-201ENST00000609898 542 ntBASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AL139327.4-201ENST00000612362 153 ntBASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 AC126335.2-201ENST00000623362 4637 ntBASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.66□□□□□ -0.38
NDUFAF3Q9BU61 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 COL6A4P2-202ENST00000504443 2753 ntBASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NDUFAF3Q9BU61 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms