Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 GPR53P-205ENST00000457298 1084 ntBASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 AC000095.1-201ENST00000603208 874 ntBASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP2Q96SN8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 AC069224.1-201ENST00000566372 1715 ntBASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 AC120045.2-201ENST00000567334 178 ntBASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 PRORSD1P-202ENST00000563365 2154 ntBASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 AC018892.3-201ENST00000623986 2499 ntBASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP2Q96SN8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK5RAP2Q96SN8 AC024909.3-201ENST00000611513 2257 ntBASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 AC018665.1-201ENST00000622927 1362 ntBASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDK5RAP2Q96SN8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms