Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 AC005730.2-201ENST00000564549 1184 ntBASIC26.25■■□□□ 1.79
IFT140Q96RY7 RN7SL774P-201ENST00000577467 290 ntBASIC26.25■■□□□ 1.79
IFT140Q96RY7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
IFT140Q96RY7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC26.25■■□□□ 1.79
IFT140Q96RY7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 AL450472.2-201ENST00000603663 1156 ntBASIC26.24■■□□□ 1.79
IFT140Q96RY7 AC244157.2-201ENST00000616239 1006 ntBASIC26.24■■□□□ 1.79
IFT140Q96RY7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
IFT140Q96RY7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
IFT140Q96RY7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 AL133267.1-201ENST00000398220 340 ntBASIC26.23■■□□□ 1.79
IFT140Q96RY7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 AC091544.8-201ENST00000619490 361 ntBASIC26.23■■□□□ 1.79
IFT140Q96RY7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
IFT140Q96RY7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
IFT140Q96RY7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
IFT140Q96RY7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
IFT140Q96RY7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
IFT140Q96RY7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC26.23■■□□□ 1.79
IFT140Q96RY7 HLA-C-210ENST00000640219 976 ntBASIC26.23■■□□□ 1.79
IFT140Q96RY7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
IFT140Q96RY7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IFT140Q96RY7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IFT140Q96RY7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
IFT140Q96RY7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
IFT140Q96RY7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
IFT140Q96RY7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
IFT140Q96RY7 AL353726.2-201ENST00000623259 884 ntBASIC26.22■■□□□ 1.79
IFT140Q96RY7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IFT140Q96RY7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IFT140Q96RY7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IFT140Q96RY7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IFT140Q96RY7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
IFT140Q96RY7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
IFT140Q96RY7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 NDUFAB1P1-201ENST00000404262 460 ntBASIC26.21■■□□□ 1.79
IFT140Q96RY7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
IFT140Q96RY7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC26.21■■□□□ 1.79
IFT140Q96RY7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC26.2■■□□□ 1.79
IFT140Q96RY7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms