Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AL512356.2-201ENST00000546955 174 ntBASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AC003101.2-201ENST00000612557 442 ntBASIC13.49□□□□□ -0.25
GAFA1Q96PS6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 AC024909.3-201ENST00000611513 2257 ntBASIC13.48□□□□□ -0.25
GAFA1Q96PS6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 AL603832.2-201ENST00000566195 2125 ntBASIC13.48□□□□□ -0.25
GAFA1Q96PS6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.48□□□□□ -0.25
GAFA1Q96PS6 SPDYE7P-202ENST00000420373 878 ntBASIC13.48□□□□□ -0.25
GAFA1Q96PS6 AL353705.2-201ENST00000428243 662 ntBASIC13.48□□□□□ -0.25
GAFA1Q96PS6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 AC008677.1-201ENST00000519230 1561 ntBASIC13.48□□□□□ -0.25
GAFA1Q96PS6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GAFA1Q96PS6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 AC069224.1-201ENST00000566372 1715 ntBASIC13.47□□□□□ -0.25
GAFA1Q96PS6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
GAFA1Q96PS6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms