Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 CRYGEP-201ENST00000412192 528 ntBASIC11.79□□□□□ -0.52
C9orf85Q96MD7 AC098831.1-202ENST00000438821 336 ntBASIC11.79□□□□□ -0.52
C9orf85Q96MD7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 MIR7706-201ENST00000613747 67 ntBASIC11.79□□□□□ -0.52
C9orf85Q96MD7 AL773604.1-201ENST00000617417 272 ntBASIC11.79□□□□□ -0.52
C9orf85Q96MD7 AC011477.6-201ENST00000604980 1927 ntBASIC11.79□□□□□ -0.52
C9orf85Q96MD7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.79□□□□□ -0.52
C9orf85Q96MD7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC013268.4-201ENST00000637413 2228 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 RHOQP3-201ENST00000437982 621 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC079781.3-201ENST00000449110 356 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 HCG4B-203ENST00000450128 991 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC096734.2-201ENST00000562054 433 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC010507.1-201ENST00000633895 436 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 PPT1-215ENST00000641471 2368 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC020658.6-201ENST00000623564 1870 ntBASIC11.78□□□□□ -0.52
C9orf85Q96MD7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.78□□□□□ -0.52
C9orf85Q96MD7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms